Date of Award
Spring 5-14-2016
Degree Type
Thesis
Degree Name
MS Microbiology
Department
Biology
Advisor
Tin-Chun Chu, Ph.D
Committee Member
Daniel B. Nichols, Ph.D
Committee Member
Constantine Bitsaktsis, Ph.D
Committee Member
Angela V. Klaus, Ph.D
Committee Member
Jane L. Ko, Ph.D
Keywords
flow cytometry, cyanobacteria, algal bloom, freshwater, cyanotoxin
Abstract
Eutrophication, a process that occurs due to excessive accumulation of nutrients such as nitrogen and phosphorous is primarily from anthropogenic nitrogen and natural occurrences. This phenomenon causes cyanobacterial overgrowth which can potentially lead to toxic algal blooms that affect public drinking water sources and recreational usage. An immediate need to detect bloom forming cyanobacteria in freshwater bodies early hand is critical to implement prevention strategies. These microorganisms contain phycobiliproteins such as phycoerytrhin, and allophycocyanin as part of the phycobillisome that allow autofluorescence. In this study, 36 freshwater bodies from 14 New Jersey counties were collected and processed for flow cytometric analysis for forward- scatter, phcyoerthrin and allophycocyanin parameters. Pure cultures of Synechococcus sp. IU 625 (S. IU 625), Cylindrospermum spp. and Microcystis aeruginosa (M. aeruginosa) were utilized as references. Polymerase chain reaction (PCR)-based assay was performed for the validation of the flow cytometric analysis. The results revealed 17 out of the 36 sites showed all three reference species and their related. 6 waterbodies showed Cylindrospermum like species, 7 waterbodies showed Microcystis and Cylindrospermum like species, 4 waterbodies showed Microcystis and Cylindrospermum like species and 2 sites showed Microcystis like species. PCR results validated these results by showing positive results for phytoplankton, cyanobacteria and Synechococcus. Flow cytometry has high potential for the rapid detection of cyanobacteria in live form due to their autofluorescence properties from the phycobilisome.
Recommended Citation
Patel, Ruchit, "Flow Cytometric Analysis for Cyanobacteria in 36 New Jersey Freshwater Bodies" (2016). Seton Hall University Dissertations and Theses (ETDs). 2169.
https://scholarship.shu.edu/dissertations/2169
